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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109089204
Protein type: Globular with Signal Peptide
Type Confidence: 0.53
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKPWLSPAP RRLPTAAPGG GPWGGAAYPP PPSMPPIGLD NVASYAGQFN QDYLSGMAAN  60
   61 MSGTFGGANV PNLYPGAPGA GYPPVPPGGF GQPPSAQQPV PPYGMYPPPG GNPSSGMPSY 120
  121 PPYPGAPVPG QPMPPPGQQP PGAYPGQPPV TYPGQPPVPL PGQQQQPVPS YPGYPGSGTV 180
  181 TPAVPPTQFG SRGTIADAPG FDPLRDAEVL RKAMKGFGTD EQAIIDCLGS RSNKQRQQIL 240
  241 LSFKTAYGKD LIKDLKSELS GNFEKTILAL MKTPVLFDVY EIKEAIKGVG TDEACLIEIL 300
  301 ASRSNEHIRE LNRAYKAEFK KTLEEAIRSD TSGHFQRLLI SLSQGNRDES TNVDMSLAQR 360
  361 DAQELYAAGE NRLGTDESKF NAVLCSRSRA HLVAVFNEYQ RMTGRDIEKS ICREMSGDLE 420
  421 QGMLAVVKCL KNTPAFFAER LNKAMRGAGT KDRTLIRIMV SRSETDLLDI RSEYKRMYGK 480
  481 SLYHDISGDT SGDYRKILLK ICGGND

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle