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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109089797
Protein type: Transmembrane
Type Confidence: 0.61
Topology Confidence: 0.56
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKRTFSNLE TFLIFLLVMM TAITVALLSL LFITSGTIEN HKDSGGHLFS TTPNPPATQG  60
   61 STVTQSSTAT QRSTATQSST ATQTSPVTST PEPPLFQNFS GYYIGVGRAD CTGQVADINL 120
  121 MGYSKSGQNA QGILTRLYSR AFIMAEPDGS NRTVFVSIDI GMVSQRLRLE VLNRLQSKYG 180
  181 SLYRRDNVIL SGTHTHSGPA GYFQYTVFVI ASEGFSNRTF QHMVTGILKS IDIAHTNMKP 240
  241 GKIFINKGNV DGVQINRSPY SYLQNPQSER ARYSSNTDKE MVVLKMVDLN GDDLGLISWF 300
  301 AIHPVSMNNS NHLVNSDNVG YASYLLEQEK NKGYLPGQGP FVAAFASSNL GDVSPNILGP 360
  361 RCINTGESCD NANSTCPIGG SNMCIAKGPG QDMFDSTQII GRAMYQRAKE LYASASQEVT 420
  421 GPLASAHQWV DMTNVTVWLN STHTAKTCKP ALGYSFAAGT IDGVGGLNFT QGKTEGDPFW 480
  481 DTIRDQILGT PSEEIKECHK PKPILLHTGE LSKPHPWHPD IVDVQIITLG SLAITAIPGE 540
  541 FTTMSGRRLR EAVQAEFASH GMQNMTVVIS GLCNVYTHYI TTYEEYQAQR YEAASTIYGP 600
  601 HTLSAYIQLF RNLAKAIATD TVANLSRGPE PPFFQQLMVP LIPNIVDRAP IGRTFGDVLQ 660
  661 PAKPEYRVGE VAEVIFVGAN PKNSAQNETH QTFLTVEKYE ATSTSWQIVC NDASWETRFY 720
  721 WHKGLLGLSN ATVEWHIPDT AQPGIYRIRY FGHNRKQDIL KPAVILSFEG TSPAFEVVTT 780
  781 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle