YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109090264
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVARAGVLG VQWLQRASRN VVPLGARTAS RMTKDMLPGP YPRTPEERAA AAKKYNMRVE  60
   61 DYEPYPDEGM GYGDYPKLPD RSQHERDPWY SWDQPDLRLN WGEPMHWHID MYTRNRVDTS 120
  121 PTPVSWNVMC MHLFGFLAFM TFMFWVGDVY PSYQPVGPKQ YPYNNLYLER GGDPSKEPEL 180
  181 VVHYEI

Type	Start	End	Confidence
Cytoplasmic	1	123	0.92
Transmembrane Helix	124	146	0.87
Non-Cytoplasmic	147	186	0.93