YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109093964
Protein type:	Globular with Signal Peptide
Type Confidence:	0.62
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGVLEGLFGM LGFLGVALGG SPALHWYRTS CHLTEPVPGN PLGSLSFLAK DAQGLTLIHA  60
   61 RWDAHRRLQA CSWEDEPELT AAYGALCSHD TARSSFIHAP GPELQRALAT LPSQWEACRG 120
  121 PEESPAGARK KQAAGQSGVP GGGHQREKRG WTMPGTLWCG VGDSAGNSSE LGVFQGPDLC 180
  181 CREHDRCPQN ISPLQYNYGI RNYRFHTISH CDCDTRFQQC LQNQRDSISD IVGVAFFNVL 240
  241 EIPCFVLEEQ EACVAWYWWG GCRTYGTPRQ KQHLQKWPPQ QKGSRRPSKA NTTVLQDPMV 300
  301 SPRLDVAPTG LQGPQGGLKP QGARRVCRSF RRHLDQCEHQ IGPQEIKFQL LNSAQEPLFH 360
  361 CNCTRRLARF LRLHSPSEVT NMLWELLGTT CFKLAPPLDC VEGKDCSRDP RAIKVSARHL 420
  421 RRLQQRLRQL QHKGTDERQA WPSEPLRGPV SFYNQCLQLT QAARRPNGQQ KSWSQ

Type	Start	End	Confidence
Signal Peptide	1	23	0.59
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	475	0.97