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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109097647
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAAAASAPQ QLSDEELFSQ LRRYGLSPGP VTESTRPVYL KKLKKLREEE QQQHRSGGRG  60
   61 NKTRNSNNNN TAAATVVAAG PAAAAAAGMG VRPVAGDLSY LRTPGGLCRI SASGSENLLG 120
  121 GPGGASAAPT AGSKVLLGFS SDESDVEASP RDQAGGGGRK DRASLQYRGL KAPPAPLAAS 180
  181 EVTNSNSAER RKPHSWWGAR RPAGPDLQTP PGKDGAVEDE EGEGEDGEER DPEAEEPLWA 240
  241 SRTVNGSRLV PYSCRENYSD SEEEDDDDVA SSRQVLKDDS VSRHRPRRTH SKPLSPLTAK 300
  301 SAGGRLETSV QGGGGHAMND RAAAAGSLDR SRNLEEAAEQ GGGCDQVDSS PVPRYRVNAK 360
  361 KLTPLLPPPL TDMDSTLDSS TGSLLKTNNH IGGGAFNVDS PRIYSNSLPP SAAVAAASSL 420
  421 RINHANHTGS NHTYLKNTYN KPKLSEPEEE LLQQFKREEV SPTGSFSAHY LSMFLLTAAC 480
  481 LFFLILGLTY LGMRGTGVSE DGKLSIENPF GETFGKIQES EKILMMNTLY KLHDRLAQLA 540
  541 GDHECGSSSQ RTLSVQEAAA YLKDLGPEYE GIFNTSLQWI LENGKDVGIR CVGFGPEEEL 600
  601 TNITDVQFLQ STRPLMSFWC RFRRAFVTVT HRLLLLCLGV VMVCVVLRYM KYRWTKEEEE 660
  661 TRQMYDMVVK IIDVLRSHNE ACQENKDLQP YMPIPHVRDS LIQPHDRKKM KKVWDRAVDF 720
  721 LAANESRVRT ETRRIGGADF LVWRWIQPSA SCDKILVIPS KVWQGQAFHL DRRNSPPNSL 780
  781 TPCLKIRNMF DPVMEIGDQW HLAIQEAILE KCSDNDGIVH IAVDKNSREG CVYVKCLSPE 840
  841 YAGKAFKALH GSWFDGKLVT VKYLRLDRYH HRFPQALTSN TPLKPSNKHM NSMSHLRLRT 900
  901 GLTNSQGSS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle