YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109098951
Protein type:	Transmembrane
Type Confidence:	0.81
Topology Confidence:	0.47
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAVGVSRVS RLLGRSGPQL GRPVSSGAHG EEGSARMWKT LTFFVALPGV AVSMLNVYLK  60
   61 SHHGEHERSE FIAYPHLRIR TKVRPWGDGN HTLFHNPHVN PLPTGYEDE

Type	Start	End	Confidence
Cytoplasmic	1	39	0.47
Transmembrane Helix	40	59	0.77
Non-Cytoplasmic	60	109	0.66