YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109101546
Protein type:	Globular with Signal Peptide
Type Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPPSTRMNMN ILVPRSQSPR SRLPLKHSGW RHACTLQCGR LALPAAAQAN PALPVPPTPV  60
   61 LQPHPLPPQP NDISVVCAPA LASRREGSHG LRAHPAGAAQ HWEPARPAAQ PACSAPACWS 120
  121 ARRPARPRCR PSAPLDPSGT MHLSQLLACA LLLTLLSLRP SEAKPGAPPK VPRTPPGEEL 180
  181 AEPQAAGGGQ KKGDKAPGGG GANLKGDRSR LLRDLRVDTK SRAAWARLLH EHPNARKYKG 240
  241 ANKKGLSKGC FGLKLDRIGS MSGLGC

Type	Start	End	Confidence
Signal Peptide	1	49	0.74
N-region	1	40
H-region	41	46
C-region	47	49
Cleavage Site	49	50
Non-Cytoplasmic	50	266	0.96