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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109104565
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGVLIVLTVL WLFPSVKADS KAITTSLTTK WFSTPLLLEA SEFLAEDSQE KFWNFVEASQ  60
   61 NIGSSDHHGT DYSYYHAILE AAFQFLSPLQ QNLLKFCLSL RSYSATIQAF QQIAADEPPP 120
  121 EGCNSFFSVH GKTTCESDTL ETLLLTASER PKPLLFKGDH RYPSSNPESP VVIFYSEIGS 180
  181 EEFSNFHRQL ISKSNAGKIN YVFRHYIFNP RKEPVYLSGY GVELAIKSTE YKAKDDTQVK 240
  241 GTEVNTTVIG ENDPIDEVQG FFFGKLRDLH PDLEGQLKEL RKHLVESTNE MAPLKVWQLQ 300
  301 DLSFQTAARI LASPVELALV VMKDLSQNFP TKARAITKTA VSSELRTEVE ENQKYFKGTL 360
  361 GLQPGDSALF INGLHIDLDT QDIFSLFDVL RNEARVMEGL HRLGIEGLSL HNVLKLNIQP 420
  421 SEADYAVDIR SPAISWVNNL EVDSRYNSWP SSLQELLRPT FPGVIRQIRK NLHNMVFIVD 480
  481 PAHETTAELI NIAEMFLSNH IPLRIGFIFV VNDSEDVDGM QDAGVAVLRA YNYVAREVDD 540
  541 YHAFQTLTQI YNKVRTGEKV EVEHVVSVLE KKYPYVKVNS ILGIDSAYDQ NRKEARGYYE 600
  601 QTGVGPLPVV LFNGMPFERE QLDPDELETI TMHKILETTT FFQRAVYLGE VPPDQDVVEY 660
  661 IMNQPNVVPR INSRILTAER DYLDLTASNN FFVDDYARFT ILDSPGKTAA VANSMNYLTK 720
  721 KDDSFIRPVT FWIVGDFDSP SGRQLLYDAI KHQKSSNNVR ISMINNPAKE ISYENTQISR 780
  781 AIWAALQTQT SNAAKNFITK MAKEGAAEAL AAGADIAEFS VGGMDFSLFK EVFESSKMDF 840
  841 ILSHAVYCRD VLKLKKGQRA VISNGRIIGP LEDSELFNQD DFHLLENIIL KTSGQKIKSH 900
  901 IQQLRVEEDV ASDLVMKVDA LLSAQPKGDA RIEYQFFEDR HSAIKLRPKE GETYFDVVAV 960
  961 VDPVTREAQR LAPLLLVLAQ LINMNLRVFM NCQSKLSDMP LKSFYRYVLE PEISFTSDNS1020
 1021 FAKGPIAKFL DMPQSPLFTL NLNTPESWMV ESVRTPYDLD NIYLEEVDSI VAAEYELEYL1080
 1081 LLEGHCYDIT TGQPPRGLQF TLGTSANPVI VDTIVMANLG YFQLKANPGA WILRLRKGRS1140
 1141 EDIYRIYSHD GTDSPPDADD VVIVLNNFKS KIIKVKVQKK ADMVNEDLLS DGTSENESGF1200
 1201 WDSFKWGFTG GQKAEEMKQD KDDIINIFSV ASGHLYERFL RIMMLSVLKN TKTPVKFWFL1260
 1261 KNYLSPTFKE FIPYMANEYN FQYELVQYKW PRWLHQQTEK QRIIWGYKIL FLDVLFPLVV1320
 1321 DKFLFVDADQ IVRTDLKELR DFSLDGAPYG YTPFCDSRRE MDGYRFWKSG YWASHLAGRK1380
 1381 YHISALYVVD LKKFRKIAAG DRLRGQYQGL SQDPNSLSNL DQDLPNNMIH QVPIKSLPQE1440
 1441 WLWCETWCDD ASKKRAKTID LCNNPMTKEP KLEAAVRIVP EWQDYDQEIK QLQLRFQKEK1500
 1501 ETGTLYKEKA EEPRREGPQK HEEL

YRC Informatics Platform - Version 3.0
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