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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109109679
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAACEGRRSG ALGSSQSDFL TPPVGGAPWA VATTVVMYPP PPPPPHRDFI SVTLSFGESY  60
   61 DNSKSWRRRS CWRKWKQLSR LQRNMILFLL AFLIFCGFLF YINLADHWKA LAFRLEEEQK 120
  121 MRPEITGLKP ANPPVLPAPQ KADTDPEDFT EISSQKSQRR VQRGPPHLQI RPPSQDLKDG 180
  181 TQEEAMKREE VPVDPRPEGD PQRTVISWRG AVIEPERGTE LPSRKAAVPT KPPLPPSRTQ 240
  241 GTPAHPNYRQ KGVIDVFLHA WKGYRKFAWG RDELKPVSRS FNEWFGLGLT LIDALDTMWI 300
  301 LGLRKEFEEA RKWVSKKLHF EKDVDVNLFE STIRILGGLL SAYHLSGDSL FLRKAEDFGN 360
  361 RLMPAFRTPS KIPYSDVNIG TGVAHPPRWT SDSTVAEVTS IQLEFRELSR LTGAKKFQEA 420
  421 VEKVTQHIHG LSGKKDGLVP MFINTHSGLF THLGVFTLGA RADSYYEYLL KQWIQGGKQE 480
  481 TQLLEDYVEA IEGVRTHLLR HSEPSKLTFV GELAHGRFSA KMDHLVCFLP GTLALGVYHG 540
  541 LPASHMELAR ELMETCYQMN RQMETGLSPE IVHFNLYPQP GRRDVEVKPA DRHNLLRPET 600
  601 VESLFYLYRV TGDRKYQDWG WEILQSFSRF TRVPSGGYSS INNVQDPQKP EPRDKMESFF 660
  661 LGETLKYLFL LFSDDPNLLS LDAYVFNTEA HPLPIWTPA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle