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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109123129
Protein type: Globular with Signal Peptide
Type Confidence: 0.46
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSMSLLPGSW GHLNVLHPRV LSVLWLQAVF TPFSSHSLWL PLYGLELPSG TLRYQDSATN  60
   61 SGAASVCVRV CSCGCTLDSD FKRCTVQVRL ELGHRAQLRK KPTTEGFTHD WMVFVRGPEQ 120
  121 CDIQHFVEKV VFWLHDSFPK PRRVCKEPPY KVEESGYAGF IMPIEVHFKN KEEPRKVCFT 180
  181 YDLFLNLEGN PPVNHLRCEK LTFNNPTTEF RYKLLRAGGV MVMPEGADTV SRPSPDYPML 240
  241 PTIPLSAFSD PKKTKPSHGS KDANKESSKA SKPHKVTKEH RERPRKDSES KSSSKELERE 300
  301 QAKSSKDTSR KLGEGRLPKE EKAPPPKAAF KEPKMALKET KLESTSPKGG PPPPPPPPPR 360
  361 ASSKRPATAD SPKPSAKKPK KSSSKGSRSA PGTSPRTSSS FSDKKPAKDK SSARGEKVKA 420
  421 ESEPREAKKA LEVEESNSED EASFKSESAQ SSPSNSSSSS DSSSDSDFEP SQNHSQGPLR 480
  481 SMVEDLQSEE SDEDDSSSGE EAAGKTNPGR DSRLSFSDSE SDNSADSSLP SREPPPPQKP 540
  541 PPPNSKVSGR RSPESCSKPE KILKKGTYDK AYTDELVELH RRLMALRERN VLQQIVNLIE 600
  601 ETGHFNVTNT TFDFDLFSLD ETTVRKMQSY LEAVAT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle