YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109123828
Protein type:	Transmembrane
Type Confidence:	0.77
Topology Confidence:	0.77
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAASRLELNL VRLLSRCEAM AAEKRDPDEW RLEKYVGALE DMLQALKVHA SKPASEVINE  60
   61 YSWKVDFLKG MLQAEKLTSS SEKALANQFL APGRVPTTAR ERVPATKTVH LQSRARYTSE 120
  121 MRSELLGTDS AEPEMDVRKR TGVAGSQPVS EKQSAAELDL VLQRHQNLQE KLAEEMLGLA 180
  181 RSLKTNTLAA QSIIKKDNQT LSHSLKMADQ NLEKLKTESE RLEQHTQKSV NWFLWAMLII 240
  241 VCFIFISMIL FIRIMPKLK

Type	Start	End	Confidence
Non-Cytoplasmic	1	231	0.91
Transmembrane Helix	232	252	0.97
Cytoplasmic	253	259	0.77