YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109124678
Protein type:	Globular with Signal Peptide
Type Confidence:	0.57
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNSKAGRRS CDALPAAYAR KMAASQQQAS AASSAAGVSG PSSAGGPGPQ QQPQPPAQLV  60
   61 GPAQSGLLQQ QQQDFDPVQR YKMLIPQLKE SLQTLMKVAA QNLIQNTNID NGQKSSDGPI 120
  121 QRFDKCLEEF YALCDQLELC LRLAHECLSQ SCDSAKHSPT LVPTATKPDA VQPDSLPYPQ 180
  181 YLAVIKAQIS CAKDIHTALL DCANKVTGKT PAPPAGPGGT L

Type	Start	End	Confidence
Signal Peptide	1	44	0.55
N-region	1	35
H-region	36	41
C-region	42	44
Cleavage Site	44	45
Non-Cytoplasmic	45	221	0.99