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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109128979, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.49
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQPAGLEGPG TFGRWPLLSP LLLLLLLLLL LQPVTCVYTT PGAPRARTTL GASRAHTMPG  60
   61 TYAPSTTLGS PSTQGLREQA RALMRDFPLV DGHNDLPLVL RQVYQKGLPD VNLRNFSYGQ 120
  121 TSLDRLRDGL VGAQFWSAYV PCQTQDRDAL RLTLEQIDLI RRMCASYSEL ELVTSAKALN 180
  181 DTQKLACLIG VEGGHSLDNS LSVLRTFYML GVRYLTLTHT CNTPWAESSA KGVHSFYNNI 240
  241 SGLTGFGEKV VAEMNRLGMM VDLSHVSDAV ARRALEVSQA PVIFSHSAAR GVCNSARNVP 300
  301 DDILQLLKKN GGIVMVSLSM GVIQCNPSAN VSTVADHFDH IKAVIGSKFI GIGGDYDGAG 360
  361 KFPQGLEDVS TYPVLIEELL SRGWSKEELQ GVLRGNLLRV FSRVEKVQEE NEWRSPLEDK 420
  421 FPDEQLSSSC RSDLSRLRQR QSLTSDQKLT EIPTHWTPKL SAKLPLSESS PNMAPVFAVV 480
  481 VTFPVLILWL 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle