YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109132048
Protein type:	Transmembrane
Type Confidence:	0.71
Topology Confidence:	0.59
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAEDAVATG ADPSELESGG LLHEIFTSPL NLLLLGLCIF LLYKIVRGDQ PAASGDSDDD  60
   61 EPPPLPRLKR RDFTPAELRR FDGVQDPRIL MAINGKVFDV TKGRKFYGPE LIFGFVFEEG 120
  121 PYGVFAGRDA SRGLATFCLD KEALKDEYDD LSDLTAAQQE TLSDWESQFT FKYHHVGKLL 180
  181 KEGEEPTVYS DEEEPKDESA RKND

Type	Start	End	Confidence
Non-Cytoplasmic	1	24	0.83
Transmembrane Helix	25	43	0.68
Cytoplasmic	44	204	0.59