YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109468574, gi...
Protein type:	Transmembrane
Type Confidence:	0.61
Topology Confidence:	0.48
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFPRPLTPLA APKSAKTLAR TPKRAPLGRA RAGIGGPPLL LPSMLMFAVI VASSGLLLMI  60
   61 ERGILSEMKP LPLHPPSHKG AAWSGTDPKP RGLSFDAEDS DLQVREDIRN RTLRAVCGQP 120
  121 GMPRDPWDLP VGQRRTLLRH ILVSDRYRFL YCYVPKVACS NWKRVLKVLA GVLNNVDVRL 180
  181 KMDHRSDLVF LADLRPEEIR YRLQHYFKFL FVRDPLERLL SAYRNKFGEI REYQQRYGAE 240
  241 IVRRYRAGAG PSPAGDDVTF PEFLRYLVDE DPEHMNEHWM PVYHLCQPCA VHYDFVGSYE 300
  301 RLEADANQVL EWVRAPSHVR FPARQAWYRP ASPESLHYHL CNAPRALLQD VLPKYILDFS 360
  361 LFAYPLPNVT KEACR

Type	Start	End	Confidence
Cytoplasmic	1	37	0.48
Transmembrane Helix	38	56	0.56
Non-Cytoplasmic	57	375	0.90