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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109469352, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.49
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSPPAYPGI RISGCWALGA ESSNAGSLDR LLPPVGTGRS PRKRTTSQCK SEPPLLRTSK  60
   61 RTIYTAGRPP WYNEHGTQSK EAFAIGLGGG SASGKTTVAR MIIEALDVPW VVLLSMDSFY 120
  121 KVLTQQQQEQ AACNNFNFDH PDAFDFDLII STLKKLKQGR SVQIPIYDFT THSRKKDWKT 180
  181 LYGANVIIFE GIMAFADKTL LELLDMKIFV DTDSDIRLVR RLRRDISERG RDIEGVIKQY 240
  241 NKFVKPAFDQ YIQPTMRLAD IVVPRGSGNT VAIDLIVQHV HSQLEERELS VRAALASAHQ 300
  301 CHPLPQTLSV LKSTPQVRGM HTIIRDKETS RDEFIFYSKR LMRLLIEHAL SFLPFQDCTV 360
  361 QTPQGQDYVG KCYAGKQITG VSILRAGETM EPALRAVCKD VRIGTILIQT NQLTGEPELH 420
  421 YLRLPKDISD DHVILMDCTV STGAAAMMAV RVLLDHDVPE DKIFLLSLLM AEMGVHSVAY 480
  481 AFPRVRIITT AVDKRVNDLF RIIPGIGNFG DRYFGTDAVP DGSDDDEVTS VG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle