YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109481654
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKAWGVLWIV LGLSLWPKPG TASSLPMVMD SIIQALEELE QKVLVTEAGV TASAWILSAK  60
   61 NYSSHNSLHQ HLLLKAPSQN TTEPDTHSLS PELQALISEV AQHDVRDGQE YGVVLAPDGS 120
  121 TVAVKPLLVG LEAGLQGRSV ANLSSDCLDT CDTGAIWPGL KDAFTNVSSP DAGATLPNDK 180
  181 AKTPTTVDRL LAVTLAGDLG LTFLHRSQTW SPPGLGIEGC WDQLSAPRVF TLLDHKASRL 240
  241 TMAFLNGALD GALLGAHLSR IPKPHPPLSR LLREYYGAGV DGDPAFRSNF RRQNGVALTS 300
  301 APTLAQQVWE ALVLLQKLEP GHPRLQNMSQ KQLAQVATFA TKEFTEAFLG LKRRFARKPD 360
  361 EKKARAVRAK KPMPSAHLKA EPI

Type	Start	End	Confidence
Signal Peptide	1	24	0.96
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	383	0.99