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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109481135, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.28
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQPLWALTL LGLMGLGLSL RSRKPESFRS ETELNHLVVD EASGVVYVGA VNALYQLSAD  60
   61 LQVQQHVVTG PFLDNKKCTP PIEPSQCHEA MLTDNFNQLL LLDPPGKRLV ECGSLFKGIC 120
  121 ALRAMSNISV RLFYEDGSGE KSFVASNDER VATVGLVSST RPDGERVLFV GKGNGPHDNG 180
  181 IIVSTRLLDR SEGREAFEAY SDHTTFKAGY LSTNTQQFVA AFEDGRYVFF IFNQQDKHPA 240
  241 KNRTLLARMC KDDPSYYSYV EMDLLCKDPT EPQNSVFGTC LAASVATPGA GRALYAVFSR 300
  301 DGRSTGGPGA GLCMFPLEKV HEMMEANRNT CYAGTRESGR TNFYKPFHGD IQCGGHARGA 360
  361 SESFPCGSEH LPYPLGSRDG LEATALLHRG GLNLTAVTVT AENGHTIAFL GTSDGRILKV 420
  421 YLAPDGTSSE YGSIPVDINK KIKGDLALSG NLSNLYAMTQ DKVFRLPVQE CLSYATCAQC 480
  481 RDSQDPYCGW CVIEGRCTRK SECSRAEEAG HWLWSREKSC VTITDAFPQN MSRRAQGEVR 540
  541 LSVSPLPTLA KEDELLCLFG ESPPHSARVE DDAVICNSPS SIPSTPPGQD HVDVSIQLLF 600
  601 KHGNVFLTSH QYPFYDCREA MSLVENLPCI SCASNRWTCQ WDLQYYECRE ASPNPEDGII 660
  661 RAHMEDNCPQ FLAPNPLVIP MNHETEVTFQ GKNLETVKVS SLYVGSDLLK FEETVTMHES 720
  721 DTFSFRTPKL SHDANETLPL HLYVKSFGKN IDSKLQVTLY NCSFGRSDCS LCLAADPAYR 780
  781 CVWCRGQNRC VYEALCSNVT SECPPPVITR IQPETGPLGG GILVTIHGSN LGVKADDVKK 840
  841 ITVAGQDCAF EPRGYSVSTR IVCAIEASET PFTGGIEVDV NGKLGHSPPH VQFTYQQPQP 900
  901 LSVEPRQGPQ AGGTTLTING TYLDTGSKED VRVTLNDVPC EVTKFGAQLQ CVTGSQLAPG 960
  961 QVALEISYGG SRVPSPGISF TYCENPVLRA FEPLRSFVSG GRSINVTGQG FSLIQKFAMI1020
 1021 VIAEPLRSWR RRREAGSLEP VTVMGTEYVF YNDTKVVFLS PAVPEEPEAY NLTALIQMDG1080
 1081 HRALLRTEAG AFEYVADPTF ENFTGGVKKQ VNKLIHARGT NLNKAMTLEE AEAFVGAERC1140
 1141 IMKTLTETDL YCEPPEVQPP PKRRQKRDTA HNLPEFIVKF GSREWVLGRV EYDTRASDVP1200
 1201 LSLILPLVMV PMVFIIVVSI YCYWRKSQQA EREYEKIKSQ LEGLEESVRD RCKKEFTDLM1260
 1261 IEMEDQTNDV HEAGIPTLDY KTYTDRVFFL PSKDGDKDVM ITGKLDIPES RRPIVEQALY1320
 1321 QFSNLLNSKS FLINFIHTLE NQREFSARAK VYFASLLTVA LHGKLEYYTD IMRTLFLELM1380
 1381 EQYVVAKNPK LMLRRSETVV ERMLSNWMSI CLYQYLKDSA GEPLYKLFKA IKHQVEKGPV1440
 1441 DAVQKKAKYT LNDTGLLGDD VEYAPLTVSV IVQDEGIDAI PVKVLNCDTI SQVKEKIIDQ1500
 1501 VYRTQPCSCW PKPDSVVLEW RPGSTAQILS DLDLTSQREG RWKRINTLMH YNVRDGATLI1560
 1561 LSKVGVSQQP EDSQQDLPGE RHALLEEENR VWHLVRPTDE VDEGKSKRGS MKEKERTKAI1620
 1621 TEIYLTRLLS VKGTLQQFVD NFFQSVLAPG HAVPPAVKYF FDFLDEQAEK HDIRDEDTIH1680
 1681 IWKTNSLPLR FWVNILKNPH FIFDVHVHEV VDASLSVIAQ TFMDACTRTE HKLSRDSPSN1740
 1741 KLLYAKEIST YKKMVEDYYK GIRQMVQVSD QDMNTHLAEI SRAHTDSLNT LVALHQLYQY1800
 1801 TQKYYDEIIN ALEEDPAAQK MQLAFRLQQI AAALENKVTD L

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