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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109478133
Protein type: Transmembrane
Type Confidence: 0.52
Topology Confidence: 0.31
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRTQRLKAKA SDEIVAALWL VPYLGMTSEE LAVTVPGLQW PQLGTWRKLA EYGEHTLTGA  60
   61 HHVLGSAPCT VCHTLLLGLA FLLRSATPLL ESSHTRALSV HQARLAAAGI DGLEKHGLLS 120
  121 RTHSSPAPSM SPHPAADCPR QPASATGIAY DCLMLKHQCI CGNSTTHPEH AGRIQSIWSR 180
  181 LQETGLLNKC ERIQGRKASL EEIQLVHSEH HSLLYGTSPL DGQKLDPRTL LGDDSRKFFS 240
  241 SLPCGGLGVD SDTIWNELHS SGAARMAVGC VIELASKVAS GELKNGFAVV RPPGHHAEES 300
  301 AAMGFCFFNS VAITAKYLRD QLNISKILIV DLDVHHGNGT QQAFYADPSI LYISLHRYDE 360
  361 GNFFPGSGAP NEVGVGLGEG YNVNIAWTGG LDPPMGDVEY LEAFRTVVMP VAREFDPDMV 420
  421 LVSAGFDALE GHTPPLGGYK VTAKCFGHLT KQLMTLANGR VALALEGGHD LTAICDASEA 480
  481 CINALLGNEP GSLEEDVLHQ SVNTNAAASL QKTIEIQSKY WKSIKMVAVA RGCALPASQL 540
  541 QEETETVSAL ASLTVDVEQP FAQEDGSIRG ETGQWELVRG IVPRYTAVMC PFEVAKELNG 600
  601 KGVMGGTAES GKQG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle