YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109485856, gi...
Protein type:	Transmembrane
Type Confidence:	0.61
Topology Confidence:	0.46
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSSDLHFDK VTSLLTLPSI SFLIQGSISV MLNIITSTFP VDMLVQKYIT VETMLVLNCS  60
   61 TKLLLLENML KSHFPESLKV YGAVMNINRG NPFQKEVVLD SWPDFKAIIT RRQREITLTI 120
  121 TLMRMLCSTK MSELTNSYWK NMMLLTGTKF FKYKIELSFV PLPFSSRTGS TPRLTYLSVT 180
  181 DADLLNRTWS RGGNQQCLRY LAKLIACFPS VCVRDEKGNP VSWGITDQFA TMCHGYTLPD 240
  241 HRRKGYSRLV ALTLARKLQS RGFPSQGNVL DDNMASINLL KSVHAEFLPC RFHRLILTPA 300
  301 AFSRQAHH

Type	Start	End	Confidence
Cytoplasmic	1	13	0.46
Transmembrane Helix	14	35	0.53
Non-Cytoplasmic	36	308	0.83