YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109487992
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.92
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPQEQYSHHR STMPSSEGPH IYKVGIYGWR KRCLYFFVLL LMILILVNLA MTIWILKVMN  60
   61 FTIDGMGNLR ITEKGLKLEG DSEFLQPLYA KEIKSRPGNA LYFKSARNVT VNILNDQTKV 120
  121 LTQLVTGPKA YEARGKKLEL MKSWGRLLYY ADAGEDVEKE EHSSIVGAEG TVFPKSIETP 180
  181 NVRADPFKEL RLESPTRSLV MEAPKGVEIN AEAGNMEATC RSELRLESKD GEIKLDAAKI 240
  241 KLPRLPRGSY TPTGTRQKVF EVCVCANGRL FLSQAGTGST CQINTSVCL

Type	Start	End	Confidence
Cytoplasmic	1	32	0.94
Transmembrane Helix	33	56	0.92
Non-Cytoplasmic	57	289	0.94