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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109491701, gi...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.90
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGPGPRRVPR DPGWMLRALA LMVAASGRVA FAFNLDTKFL VVKEAVNPGS LFGYSVALHR  60
   61 QTERQQRYLL LAGAPRDLAV DDDYTNRTGA VYLCPLTALK NDCERMDISE KSDPDHHIIE 120
  121 DMWLGVTVAS QGPAGRVLVC AHRYTKVLWS GLEDQRRMVG KCYVRGNDLQ LDPGDDWQTY 180
  181 HNEMCNSNTD YLQTGMCQLG TSGGFTQNTV YFGAPGAYNW KGNSYMIQRK DWDLSEYSYR 240
  241 GSEDQGNLYI GYTMQVGSAI LHPSEITLVT GAPRHQHMGA VFLLKQESGG DLQRRQVLKG 300
  301 TQVGAYFGSA IALADLNNDG WQDLLVGAPY YFERKEEVGG AVYVFMNQAG TSFPDQPSLL 360
  361 LHGPSRSAFG ISVASIGDIN QDGFQDIAVG APFEGLGKVY IYHSSSGGLL KQPQQIIHGE 420
  421 TLGLPGLATF GYSLSGKMDV DENLYPDLLV GSLSDHIVLL RARPVINILH RTLVARPAVL 480
  481 DPSLCTVTSC VQVELCFAYN QSAGNPNYRR NITLAYTVEA DRDRRPPRLR FARSQSSVFH 540
  541 GFFSMPETHC QTLELLLMDN VRDKLRPIVI TMNYSLPLRM PDRLKLGLRS LDAYPVLNQA 600
  601 QAMENHTEVH FQKECGPDNK CDSNLQMRAA FVSEQLQPLS RLQYSRDTKK LFLSINVTNS 660
  661 PSRQRAGEDA HEALLTLEVS SALLLSSVRP AGTCQANETN TVCELGNPFK RNQRMELLIA 720
  721 FEVTGVTLHT RDLRAHLQLS TSSHQDNLQP MFLTLQVDYT LQASLSLMNH RLQSFFSGTV 780
  781 MGEAAMKTVK DVGSPLKYEF QVSPVGDGLA ALGTLVLGLE WPYEVTNGKW LLYPTEITIH 840
  841 SNGSWPCQPH GNLVNPLNLT LSDPGVKPLS PQRRRRQLDP GGDQGPPPVT LAAAKKAKSE 900
  901 TVLTCSNGRA RCVWLECPLP DASNITNVTV KARVWNSTFI EDYKDFDRVR VDGWATLFLR 960
  961 TSIPTINMEN KTTWFSVDID SELVEELPAE IELWLVLVAV GAGLLLLGLI IILLWKCDFF1020
 1021 KPTRYYRIMP KYHAVRIREE DRYPPPGSTL PTKKHWVTSW QIRDRYY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle