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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|149040928, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVISGSDSV LLSNGSISTS TTNPSPLTPS DGDLTAQQLA PRETPRTKAS PNGCLQLNGT  60
   61 VKSSFLPLDN QRTPQTALCC HPCPYHHPVT SHTSHQECHP EAGLAASSAL TSGCIQPHSE 120
  121 YSASLCPNHS PVYQAAHCRQ PSPSLCLHHP WPDHFQHQPV RQHLAIIGPS RPFRFPRSYA 180
  181 ALLADWPVVV LGLCTLLIVV CALVGVLVPE LPDFSDPLLG FEPRGTAIGQ RLVTWNNMMK 240
  241 NTGYKATLAN YPYKYAEEQA KSRRDDRWSG DHHERERREV DWNFQKDSFF CDVPSDGYSR 300
  301 VVFASAGGET LWNLPAIKSM CDVDNSRIRS HPQFSDLCQR TTAVSCCPSW TLGNYIAILN 360
  361 NRSSCQKIVE RDVSHTLKLL RTCAKHYQNG TLGPDCWDKA ARRKDQLKCT NVPRKCTKYN 420
  421 AVYQILHYLV DKDFMTSKTA DYAVPALKYS MLFSPTEKGE SMMNIYLDNF ENWNSSDGIT 480
  481 TVTGIEFGIK HSLFQDYLLM DTVYPAIAIA IVLLIMCVYT KSVFITLMTM FAIISSLIVS 540
  541 YFLYRVVFNF EFFPFMNLTA LIILVGIGAD DAFVLCDVWN YTKSDKPRAE TSEAVSVTLQ 600
  601 HAALSMFVTS FTTAAAFYAN YVSNITAIRC FGVYAGTAIL VNYVLMVTWL PAVIVLHERY 660
  661 LLNIFTCFRK PQPQAYHKSC WTVLCRKGRK ALFAISEASR IFFEKVLPCI VIKFRYLWLV 720
  721 WFLALTVGGA YIVCINPKMK LPSLELSEFQ VFRSSHPFER YDAEFKKLFM FERVHHGEEL 780
  781 HMPITVIWGV SPEDSGDPLN PKSKGELTLD STFNIASPAS QAWILHFCQK LRNQTFFHQT 840
  841 EQQDFTSCFI ETFKQWMENQ DCDEPALYPC CSHCSFPYKQ EVFELCIKKA IMELDRSTGY 900
  901 HLNNKTPGPR FDINDTIRAV VLEFQSTFLF TLAYEKMQQF YKEVDSWISH ELSSAPEGLS 960
  961 HGWFVSNLEF YDLQDSLSDG TLIAMGLSVA VAFSVMLLTT CNIIISLYAI ASIAGTIFVT1020
 1021 VGSLVLLGWE LNVLESVTIS VAVGLSVDFA VHYGVAYRLA PDPDREGKVI FSLGRMGSAI1080
 1081 AVAALTTFVA GAMMMPSTVL AYTQLGTFMM LVMCVSWAFA TFFFQCLCRC LGPQGTCGQI1140
 1141 PLPKKLQCSA FSHTSAARPG GRAPGKATNA YSVDARGQKS ELEHELYELQ PLGSHSCTSS1200
 1201 DMTAYEGPCI CSEFFNGQAK NLRMPMSAAY SSELTKSPRS EPGSALLQPC LEQDTMCHFS1260
 1261 LNPRCNCPNA YTHRKYGLPE IHCQQMGDSL CHKCASTAGS FVQIQNAAAP LKATHHAAEG1320
 1321 LLHPVQHMLP PGMQNSQSRN FFLHPVQHFQ AQESLGPTST RGRENTDERP PRTAEPPPAG1380
 1381 ASRSSESFQR ACCNPENNQR RLCKSRDSGD TEGSGGTETK VCGLANQTDK VEKEVKPSLL1440
 1441 QTDEIVNSEQ LNHDEPKLIF SHLIREAGCR PCPDRPQGCR SLRLKCGSTD CQAPDLEANV1500
 1501 PAVPTHSDLS VSGESLLIKT LQ

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