YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109503046, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALPPLFPLG KRKSRPNTGS AAALLPQSLS RRRVDWFPAP GGRGLGSVRA RELCPGSAGL  60
   61 RAARAGIRDC GRVRRAPIWV PGKCKAMNGT ANPLLDREEH CLRLGESFEK RPRASFHTIR 120
  121 YDFKPASIDT SCEGELQVGK GDEVTITLPH IPGSTPPMTV FKGNKRPYQK DCVLIINHDT 180
  181 GEYVLEKLSS SIQVKKTRAE GSSKIQARME QQPTRPPQPS QPPPPPPPMP FRAPTKPPAG 240
  241 PKTSPLKDNP SPEPQLDDIK RELRAEVDII EQMSSSSGSS SSDSESSSGS DDDDSSSSAG 300
  301 EDNGPASPPQ PSHQQPYNSR PTVANGTSRP QGSAQLMNTL RNDLQLSESG SDSDD

Type	Start	End	Confidence
Signal Peptide	1	30	0.95
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	355	0.99