YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109505943
Protein type:	Transmembrane
Type Confidence:	0.67
Topology Confidence:	0.59
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNKGRRPSDP KSAVLVMAIQ LRVFYLVPLL LASYVQTTPR LEKMKMDCYK DVKGTIYNYE  60
   61 ALSLNGKERI PFKQYAGKHV LFVNVATYCG LTIQYPELNA LQDDLKQFGL VILGFPCNQF 120
  121 GKQEPGDNTE ILPGLKYVRP GKGFLPNFQL FAKGDVNGEK EQEIFTFLKR SCPHPSETVV 180
  181 TSKHTFWEPI KVHDIRWNFE KFLVGPNGVP VMRWFHQAPV STVKSDILAY LNQFKTI

Type	Start	End	Confidence
Cytoplasmic	1	12	0.59
Transmembrane Helix	13	32	0.61
Non-Cytoplasmic	33	237	0.95