YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109519124
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.65
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTAAVFFGCA FIAFGPALSL YVFTIATDPL RVIFLIAGAF FWLVSLLLSS VFWFLVRVIT  60
   61 DNRDGPVQNY LLIFGVLLSV CIQELFRLAY YRLLK

Type	Start	End	Confidence
Non-Cytoplasmic	1	3	0.65
Transmembrane Helix	4	25	0.90
Cytoplasmic	26	31	0.59
Transmembrane Helix	32	56	0.90
Non-Cytoplasmic	57	69	0.58
Transmembrane Helix	70	91	0.87
Cytoplasmic	92	95	0.66