YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109390302
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFMLLFFAST LSSASDLSII SYDQSHGTKS SWRTDDEVMA IYEDWLVKHG KAYNSLGEKE  60
   61 RRFEVFKDNL RFIDEHNSEN RTYRVGLNRF ADLTNEEYRS MYLGALSGIR RNKLRKISDR 120
  121 YTPRVGDSLP DSVDWRKEGA VVGVKDQGSC GSCWAFSAVA AVEGINKIVT GDLISLSEQE 180
  181 LVDCDNSYNE GCNGGLMDYG FEFIINNGGI DSEEDYPYLA RDGRCDTYRK NARVVSIDSY 240
  241 EDVPVNNEAA LQKAVANQPV SVAIEAGGRD FQLYSSGVFS GRCGTALDHG VVAVGYGTEN 300
  301 GQDYWIVRNS WGKSWGESGY LRMARNIRKP TGICGIAMEA SYPIKKGQNP PNPGPSPPSP 360
  361 VKPPSVCDNY FSCPESNTCC CIFEYANFCF EWGCCPLEGA TCCDDHYSCC PHDYPICNVN 420
  421 QGTCLMSKDN PLGVKAIRRT RAKPHWALGA EGKKSST

Type	Start	End	Confidence
Signal Peptide	1	15	0.96
N-region	1	6
H-region	7	12
C-region	13	15
Cleavage Site	15	16
Non-Cytoplasmic	16	457	0.99