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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|108705819, gi...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.88
Topology Confidence: 0.67
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATTLTPTQR YAAGALLALA LRQAQIHQSV LLGAHHHHDD DDEEQGRTST SSGGGGGSSS  60
   61 SSSNSGAGAD ADLWTHDSHG LLRPVFRFLE IDPKAWSGLE ETAASSEAKH HIGAFLRIIF 120
  121 EEDGESSSDR SVQELALAKG VDVMVMSLGN DSEVGNTIKG GDQDALPSSS GTDKSPGESS 180
  181 HDDQLGINKL TLDDIPANNH RKMALLFALL SACVADKPVS QEEEDRKSTR FRKGYDARHR 240
  241 VALRLLSTWL DVKWIKMEAI EVMVACSAMA AAKEQEQSQE SASPKSKWEK WKRGGIIGAA 300
  301 ALTGGALLAI TGGLAAPAIA AGFGALAPTL GTLVPVIGAS GFAAMATAAG SVAGSVAVAA 360
  361 SFGAAGAGLT GSKMARRIGS VKEFEFKPIG ENHNQGRLAV GILISGFAFD EDDFCRPWEG 420
  421 WQDNLERYIL QWESKHIIAV STAIQDWLTS RLAMELMKQG AMRTVLSGLL AAFAWPATLL 480
  481 AATDFIDSKW SVAIDRSDKA GKMLAEVLLK GLQGNRPVTL IGFSLGARVI FKCLQELALS 540
  541 SDNEGLVERV VLLGAPVSVK GERWEAARKM VAGRFVNVYS TDDWILGVTF RASLLTQGLA 600
  601 GIQAIDVPGV ENVDVTELVD GHSSYLSAAQ QILEHLELNT YYPVFVPLSA ANEETDGTVA 660
  661 Q

YRC Informatics Platform - Version 3.0
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