YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|108707614
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGIPVRSLLV ASIVLSSIAL HVAAAKNLDP YKVLGVDKSA SQRDIQKAFH KLSLKYHPDK  60
   61 NKSKGAQEKF AEINNAYDIL SDEEKRKNYD LYGDEKGNPG FGGGNFGNRE GYTYFTGGGA 120
  121 KTSHFSSGDG WQTMGGQGNT KTFSFSFGGG NPGAGGGNPF NFDFGDVFSN IFSGGSMGGS 180
  181 QHTGSAGKAR RGTKSSGHDS SSVNIQEVTM QIFNKETADQ GITWLLLFYT PNTKGQFVLE 240
  241 SVVEDVARSL DGALRAGKVN CDHEKALCKK AGVSIGKSAR LFIYSYTTTE KGSLHEYSGD 300
  301 YDSKSLKTFC QEHLPRFSKR VDINQFSFPS NIIPNLPQVL LLSAKKDTPA MWRAVSGMFR 360
  361 SRLIFYDAEV QDVSHPLLKS LGVKNIPALI GRSVNGEEQL LKDGISVKDL RSGIKELKNL 420
  421 LENFEKKNKK LASNQAKKPA HTDQPKENKI PLLTASNFEE ICGEKTSVCI LGIFKSSKAK 480
  481 ENLEAVLSEI SQKTLIRGQN YNSGNAVAYA LLDGNKQSAF LSTFDKSAFK SSDKLLLAYK 540
  541 PRRGRYAVYD NEVTMEEAES LPVTEYMLLV RNRTLVESLL LQQAGLCRLL AHTFGPAQRV 600
  601 VGSKHSSPGP DLRMASRSLS PLSSASKLCS RCGQADEPKM AATTFSSSPS KVTTAKFVTG 660
  661 LRA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle