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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|58372441, gi|...
Protein type: Transmembrane
Type Confidence: 0.96
Topology Confidence: 0.83
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNNYFLRKEN FFILFCFVFV SIFFVSNVTI IKCNNVENKI DNVGKKIENV GKKIGDMENK  60
   61 NDNVENKNDN VGNKNDNVKN ASSDLYKYKL YGDIDEYAYY FLDIDIGKPS QRISLILDTG 120
  121 SSSLSFPCNG CKDCGIHMEK PYNLNYSKTS SILYCNKSNC PYGLKCVGNK CEYLQSYCEG 180
  181 SQIYGFYFSD IVTLPSYNNK KKISFEKLMG CHMHEESLFL HQQATGVLGF SLTKPNGVPT 240
  241 FVDLLFKHTP SLKPIYSICV SEHGGELIIG GYEPDYFLSN QKEKQKMDKS DNNSSNKGNV 300
  301 SIKLKNNDKN DDEENNSKDV IVSNNVEDIV WQAITRKYYY YIKIYGLDLY GTNIMDKKEL 360
  361 DMLVDSGSTF THIPENIYNQ INYYLDILCI HDMTNIYEIN KRLKLTNESL NKPLVYFEDF 420
  421 KTALKNIIQN ENLCIKIVDG VQCWKSLENL PNLYITLSNN YKMIWKPSSY LYKKESFWCK 480
  481 GLEKQVNNKP ILGLTFFKNK QVIFDLQQNQ IAFIESKCPS NLTSSRPRTF NEYREKENIF 540
  541 LKVSYINLYC LWLLLALTIL LSLILYVRKM FYMDYFPLSD QNKSPIQEST 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle