YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|110432095
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.96
Topology Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEAGKKNSLF CCVASLICLW TTAYGELTAA GVNYEVEALM GFKNSLHDPH NILNWDEHAV  60
   61 DPCSWAMVTC SPDNFVTSLG APSQRLSGTL SPYIGNLTNL QSLLLQDNNI SGHIPSELGR 120
  121 LPKLKTIDLS SNNFSGQIPS ALSNLNNLQY LRLNNNSLDG AIPASLVNMT QLTFLDLSYN 180
  181 DLSTPVPPVH AKTFNIVGNP QICGTEQGCA GTTPVPQSVA LNNSQNSQPS GNNKSHKIAL 240
  241 AFGSSLGCIC LLVLGFGFIL WWRQRHNQQI FFDVNEQHNE ELSLGNLRSF QFKELQVATN 300
  301 NFSSKNLIGK GGFGNVYKGY LQDGTVVAVK RLKDGNAIGG VIQFQTEVEM ISLAVHRNLL 360
  361 RLHGFCMTTT ERLLVYPYMS NGSVATRLKA KPALDWGTRK RIALGAARGL LYLHEQCDPK 420
  421 IIHRDVKAAN ILLDDYCEAV VGDFGLAKLL DHRDSHVTTA VRGTVGHIAP EYLSTGQSSE 480
  481 KTDVFGFGIL LLELISGLRA LEFGKSTNQK GALLDWVKKI HLEKKLELLV DKDLKNNYDR 540
  541 IELEEIVQVA LLCTQYLPSH RPKMSEVVRM LEGDGLAEKW EASQRAEESR SRANEFSSSE 600
  601 RYSDLTDDSS LLVQAMELSG PR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle