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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109659347, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALRAAVFEL GGILTLPSAT SFWDRAEEEL ALPGGFLSKA FLRGGPDGPS IRVMKGEITF  60
   61 SQWVPFMEED CRKCSKDCGI CLPENFSIKQ IFEKILSSRK INYPMLQAAV TLKQKGFTTC 120
  121 ILTNTWLDDS AERGSLAQVL CELKPHFDFL IESCQIGMVK PDPQIYKFVL DTLKISPSEV 180
  181 VFLDNFETNL KPAHEMGMVT IFVHDTDAAL KELEKVTGVQ LLQTSAPQPI SCDPSTMTHG 240
  241 YVPIKPGVRL HFVELGSGPV VCLCHGFPES WFSWRYQIPA LAQAGFRVLA VDMKGYGESS 300
  301 APPEIEEYSL EVLSKDMITF LDKLGISQAV FIGHDWGGML VWTIALFHPE RVRAVASLNT 360
  361 PFMPSNPKVS TMEIIKATPT FNYQLYFQEP GVAEAELEKN LSRTFKSFFR SNDETFITVS 420
  421 RTCEMGGLLV NTPEEPTLSK MVTEEDIQFY VQEFKKSGFR GPLNWYRNMD KNWEWGFKGS 480
  481 GRKILIPALM VTAEKDLVLT PEMSKHMEDW IPHLKRGHIK DCGHWTQMEK PTELNRILIE 540
  541 WLETDARDLP VVSKL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle