YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|110680472, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.76
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDDMLREYLP ILVFLAVAIG LGLVLILAAV VLAVRNPDPE KVSAYECGFN AFDDARMKFD  60
   61 VRFYLVSILF IIFDLEIAFL FPWAVAFQDI SMVGFWSMMV FLGVLTIGFA YEWKKGALEW 120
  121 Q

Type	Start	End	Confidence
Non-Cytoplasmic	1	10	0.76
Transmembrane Helix	11	34	0.91
Cytoplasmic	35	62	0.83
Transmembrane Helix	63	85	0.90
Non-Cytoplasmic	86	91	0.72
Transmembrane Helix	92	113	0.90
Cytoplasmic	114	121	0.85