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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|110757630
Protein type: Transmembrane
Type Confidence: 0.97
Topology Confidence: 0.62
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEIQKFEVL FILGGPGAGK GTLCRNINEK YGYVHLSAGD LLREERMNSN SKYGELIENY  60
   61 IKDGKIVPVA ITCSLLDRAM QMTDSPHKRF LIDGFPRNQD NIDGWNEAMS NKCVIKGVLF 120
  121 CQCSKEVCTQ RCLKRGAAGS GRSDDNEEVL VKRHETYISN TLPIIEYFEK EGLVYKVNSM 180
  181 QLPEKVFEEA KEILSKIVYD ASVKIPPGVI TGNYQQLGNY DECLQVKNEH GFTGKACSAT 240
  241 VNFEIAKDNG KPRQLDIGDL LLNIAIASGH TSWKSGRSSN YEWMWCVPSS CNQTDIQEAL 300
  301 ELSLDPLKVE DRVDMVICPY RILIRAVFGV TGNRWHHCLL GASRARSILV IFVIVIIAST 360
  361 SYDMAKQGHL STLNQKDKKH ILLTSFSVYT NGKNLLKTNR HYNSINCLDG LRYISICWII 420
  421 YGHTYYTEVV GVKMNLNEIL QMHKNWASIL VLNANLITDT FFLISGVLIA YTTLIKKEKS 480
  481 PREYFNVIGL YLHRYLRLTP AYAMMIGFYA TLFYKVSSGP HWDQWIGANR DYCRENWWTN 540
  541 LLYLNNYIHL PRICMSQSWY LATEMQLVWL SPIFLYPMLK FTREIFFWLV FLLGLITSIL 600
  601 IPFLITFNLR LNGTMLYYKD NTDLVNVYMQ IYTKVYNRYG SYIIGIALGY LLYKNKSKNV 660
  661 KIHTIYVILG WLIAIASGFF IFMCPLWMYF DNYSYNELEA SFYAGFHRQI FALSISWLIF 720
  721 CCAHGYGGFV NHFLSWKGWV PFSKLTYSAY LCHFVFLLVE AGSVRTTGII STMAILRSFF 780
  781 SNLCLTMLLS ALWTLCFEMP FMTLDRAFLS HKNQSNLSSK QNQEKIFGST DSSKEIYRST 840
  841 EDSSSTMIQD SENFNQKSEI GSIYDQNLKD DDKDDKCPFI FVIGSEDKNS WSQIRNVHQN 900
  901 NGYNEDSDKT QLNSGMETRI DHNYESSVNQ NLIRKKEFK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle