YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|110613761, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSHWCRNWHM AKSLFRALVA LSFLAPLWLN AAPRVITLSP ANTELAFAAG ITPVGVSSYS  60
   61 DYPPQAQKIE QVSTWQGMNL ERIVALKPDL VIAWRGGNAE RQVDQLASLG IKVMWVDATS 120
  121 IEQIANALRQ LAPWSPQPDK AEQAAQSLLD QYVQLKAQYA DKPKKRVFLQ FGINPPFTSG 180
  181 KESIQNQVLE VCGGENIFKD SRVPWPQVSR EQVLARSPQA IVITGGPDQI PKIKQYWGEQ 240
  241 LKIPVIPLTS DWFERASPRI ILAAQQLCNA LSQVD

Type	Start	End	Confidence
Signal Peptide	1	31	0.97
N-region	1	22
H-region	23	28
C-region	29	31
Cleavage Site	31	32
Non-Cytoplasmic	32	275	0.99