YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|110805076, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLFLCCNSFS DTPFSFSRKF VLDALMSFTN TPERYGVISA AFHWLSAIIV YGMFALGLWM  60
   61 VTLSYYDGWY HKAPELHKSI GILLMMGLVI RVLWRVISPP PGPLPSYSPM TRLAAKAGHL 120
  121 ALYLLLFAIG ISGYLISTAD GKPISVFGWF DVPATLADAG AQADFAGALH FWLAWSVVVL 180
  181 SVMHGFMALK HHFIDKDDTL KRMLGKSSSD YGV

Type	Start	End	Confidence
Cytoplasmic	1	40	0.93
Transmembrane Helix	41	63	0.87
Non-Cytoplasmic	64	75	0.89
Transmembrane Helix	76	97	0.88
Cytoplasmic	98	117	0.89
Transmembrane Helix	118	139	0.91
Non-Cytoplasmic	140	170	0.88
Transmembrane Helix	171	193	0.84
Cytoplasmic	194	213	0.98