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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|223948017, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKGSSHSQAG AQAVRRRRWG CLLPLLVGAA FLAEIAFLGR LDMAKNAEAV ESWTTSFYRR  60
   61 SADLGDAVGG GAASRAGGDS EDEEIRLCEQ RLEREDAVPY DRDFDSDPVL VGGAAKDWNK 120
  121 CYVGCEFGFS ASKTPDATFG IAPDPSVDGI LRSMESSQYY SENNIDVARG RGYKIVMTTS 180
  181 LSSDVPVGYF SWAEYDIMAP VPPKTEEALA AAFISNCGAR NFRLQALEML ENLDVKIDSY 240
  241 GSCHRNRDGK VDKVDTLKRY RFSLAFENSN EEDYVTEKFF QSLVAGSIPV VVGAPNIQEF 300
  301 SPGEGAILHI KELDDVASVA KTMKNIASNP DAFNQSLRWK YDGPSDSFKA LIDMAAVHSS 360
  361 CRLCIHIATK IHLKEERTPK FTNRPCSCST KKGTIYHLFI RERGRFKSES IYMRSGQLTL 420
  421 GALESAVLGK FRSLNHVPVW KDERPPSIRG GDDLKLYRIY PVGLTQRQAL YGFRFRDDSE 480
  481 LEQYIKDHPC AKLEVIFV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle