YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|110811193
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.60
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPTLTYSWRL RRDASCEFGT YQHERNTCCL CPAGFKVSTH CTNTDKTECK QCEDGYYLNN  60
   61 NNNENQCRPC KICDANAKMK EIEKCSKSSN TVCGCEEGRF CDKDKDCNVC YPCDPCPNGV 120
  121 KEQCTETHNT VCHDAKDLNG TIAAAVVVSL ILIAVAAFMI FIWKKKKFCF QVRQSTDKVQ 180
  181 TEEALPLIDL SPHLPKIADV LCWKTVKEVA RRSGMTAKDI EEQELNHPKD AREQTFGLLE 240
  241 AWSQRQGLDK AYRALITTLQ DIGEKATADK IQNIVEASSQ P

Type	Start	End	Confidence
Non-Cytoplasmic	1	140	0.62
Transmembrane Helix	141	163	0.92
Cytoplasmic	164	281	0.60