YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	MARH8_BOVIN
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNMPLHQISA IPSQDATSAR VYRSKTKEKE REEQNEKTLG HSMSHSSNIS KAGGSSVASA  60
   61 PVSSFPRTSV TPSNQDICRI CHCEGDDESP LITPCRCTGS LHFVHQTCLQ QWIKSSDTRC 120
  121 CELCKYEFIM ETKLKPLRKW EKLQMTSSER RKIMCSVTFH VIAITCVVWS LYVLIDRTAE 180
  181 EIRQGQATGI LEWPFWTKLV VVAIGFTGGL LFMYVQCKVY VQLWRRLKAY NRVIYVQNCP 240
  241 ETSKRNIFEK PALPEPNFES KDGRGVCHSD TNSSCCTEPE DTGAEIIHV

Type	Start	End	Confidence
Cytoplasmic	1	152	0.97
Transmembrane Helix	153	175	0.90
Non-Cytoplasmic	176	194	0.94
Transmembrane Helix	195	217	0.90
Cytoplasmic	218	289	0.96