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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: YEF3_YEAST
Protein type: Globular with Signal Peptide
Type Confidence: 0.54
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPVSVITTVL ACLWLSYRLY KFLTIPVSSI VSTLKIKTPP ATKVSIDKIA TDSVTIHWEN  60
   61 EPVKAEDNGS ADRNFISHYL LYLNNTQLAI FPNNPNSLYT CCSITGLEAE TQYQLDFITI 120
  121 NNKGFINKLP SIYCMTKARE ANEALKTRKW RRNTITSSTA MQPRNSKSEP APLPSHYSSV 180
  181 SLSTFSSNIT NSATSNNGSN LPAYTSLTTL KDLDSFSIDD LKKILICAQE DLHDVLSQQT 240
  241 SLLQDFQESK LELELELDNL KTHWSHEIDL RKSLKSNIKS LENSKLLTDL KIEKLNKKID 300
  301 KSKEKISKMR NDMQKWSQED TELLSKDTIK EKYFKLLNES NASVANINKE IESLQNEISK 360
  361 MEESNKRLNA SKKSLITSIV VNANVENDKP IASGELSAVL KKLNDFTLEK NGFLSNAGEE 420
  421 FLSKLNADSS LIKMIKQELS IDQELEANWK LQRSNLLKKI SALENQFNEM SLNNRNLKTK 480
  481 LMVQPYKNNG DSLAATNSNN SAEKNRSSGS IQLPLSNNMS RTGSIDLISN NNKSINNSNA 540
  541 DSAPPLRLHN PVSYSPSNEP IQPSSSLLSQ LTQDTDNRSM LSNHISSNNE NKQQPSSYSH 600
  601 ALPTTATANA TATATATNGH SRSNLWTTAQ FAQPSHQQVS TELDQAFEYD NANHLISGLQ 660
  661 NMIYDETDYP DNISNYSKGF TTDELDNYWT KQQPQVRSTN ESLFSTTGTP MSSYKANPVI 720
  721 SPYSSSHLRQ TSNATNTNPM HPQSLLAATL NDPSLQSFVR SGSFYSAPQP ANSLQNNING 780
  781 NETENISPRI SSDFNLLVPN LSPRLSNDVP IVPGNNTTLT PSHSNILTMN HQPTADNITR 840
  841 RSFHASSPPF NSIWNSNTNQ LSPPLEEQYH LDVPVGPKVP AKEPSPKPSH KRNQSNSSIS 900
  901 SAWSKFKHKS ASSPANADTD IQDSSTPSTS PSGRRMSKLL SKSGMNNLFN PHSHDS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle