YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YHR003C
Protein type:	Globular with Signal Peptide
Type Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANNTWKLIA TTALISVFST QLAKSVWKEY KLSCAANKNK TVSRPRQYDD HLFREQLARN  60
   61 YAFLGEEGMR KIKEQYIVIV GAGEVGSWVC TMLIRSGCQK IMIIDPENIS IDSLNTHCCA 120
  121 VLSDIGKPKV QCLKEHLSKI APWSEIKARA KAWTKENSHD LIFADGESPT FIVDCLDNLE 180
  181 SKVDLLEYAH HNKIDVISSM GVATKSDPTR VSINDISMTE FDPISRCVRR KLRKRGIATG 240
  241 ISVVFSNEML DPRRDDILSP IDCEHRAINA VRDEALRHLP ELGTMPGIFG LSIATWILTK 300
  301 VSGYPMKENE VKNRLKFYDS ILETFQKQMA RLNENKERSS LLGLEEVGYI VEEMFRGKSP 360
  361 ISGYSTKLAL TKWEANKEIS LTNVVLMTKE EQEIHEKRIL LDGEKLTAVY SEEVLDFIER 420
  421 LFKEEEYYS

Type	Start	End	Confidence
Signal Peptide	1	23	0.96
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	429	0.96