YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YIR043C
Protein type:	Transmembrane
Type Confidence:	0.93
Topology Confidence:	0.64
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGCQEAFRTT LLEPFSLKKD EAAKVKSFKD SVSYIEEALG VYFTEVEKQW KLFNTEKSWS  60
   61 PVGLEDAKLP KEAYRFKLTW ILKRIFKLRC LQVFLYYFLI VYTSGNVDLI SRFLFPVVMF 120
  121 FIMTRDFQNM GMIVLSVKME HKMQFLSTII NEQESGANGW DEIAKKMNRY LFEKKVWNNE 180
  181 EFFYDGLDCE WFFSCFFYRL LSLKKTMWFA SLNVELWPYV KEAQSVVTSL

Type	Start	End	Confidence
Cytoplasmic	1	84	0.92
Transmembrane Helix	85	105	0.79
Non-Cytoplasmic	106	112	0.62
Transmembrane Helix	113	129	0.64
Cytoplasmic	130	230	0.68