YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YJL220W, YIL171W-A
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.66
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCLFDQGKAV LVRTVGWPDL FVVGNIVTHI ILWRVVKWRD PNGIGTKLFD VLQLGGNTLH  60
   61 ITPTIVVGVF ETCGINLINC GLFPPLGFCF WMCRRNSHCT LLSYLYEKTF TFVCVFGLVN 120
  121 GTYILVQLIP RVKKSSLLIY VCGRLTNDRK

Type	Start	End	Confidence
Cytoplasmic	1	13	0.66
Transmembrane Helix	14	33	0.81
Non-Cytoplasmic	34	64	0.67
Transmembrane Helix	65	92	0.71
Cytoplasmic	93	108	0.68
Transmembrane Helix	109	129	0.78
Non-Cytoplasmic	130	150	0.70