YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	SUR4
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.47
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNTTTSTVIA AVADQFQSLN SSSSCFLKVH VPSIENPFGI ELWPIFSKVF EYFSGYPAEQ  60
   61 FEFIHNKTFL ANGYHAVSII IVYYIIIFGG QAILRALNAS PLKFKLLFEI HNLFLTSISL 120
  121 VLWLLMLEQL VPMVYHNGLF WSICSKEAFA PKLVTLYYLN YLTKFVELID TVFLVLRRKK 180
  181 LLFLHTYHHG ATALLCYTQL IGRTSVEWVV ILLNLGVHVI MYWYYFLSSC GIRVWWKQWV 240
  241 TRFQIIQFLI DLVFVYFATY TFYAHKYLDG ILPNKGTCYG TQAAAAYGYL ILTSYLLLFI 300
  301 SFYIQSYKKG GKKTVKKESE VSGSVASGSS TGVKTSNTKV SSRKA

Type	Start	End	Confidence
Cytoplasmic	1	70	0.47
Transmembrane Helix	71	94	0.83
Non-Cytoplasmic	95	106	0.38
Transmembrane Helix	107	131	0.79
Cytoplasmic	132	182	0.48
Transmembrane Helix	183	201	0.71
Non-Cytoplasmic	202	207	0.80
Transmembrane Helix	208	227	0.86
Cytoplasmic	228	242	0.76
Transmembrane Helix	243	264	0.89
Non-Cytoplasmic	265	284	0.90
Transmembrane Helix	285	304	0.96
Cytoplasmic	305	345	0.97