YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|111307202, gi...
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLAGPLRIM ALVITVAVTW IVVSILLSGL GFPWIQQLFA SQENSVTAEP RARKYKCGLP  60
   61 QPCPEEHLAF RVVSGAANVI GPKICLEDRM LMSSVKDNVG RGLNIALVNG VNGDLIEARA 120
  121 FDMWAGDVND LLKFIRPLHE GTLVFVASYD DPATKMNEET RKLFSDLGSK NVKDLAFRDS 180
  181 WVFVGAKGVQ NKSPFEQHMK NSKHTNKYEG WPEALEMEGC IPRRPAAS

Type	Start	End	Confidence
Cytoplasmic	1	10	0.88
Transmembrane Helix	11	35	0.89
Non-Cytoplasmic	36	228	0.97