YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|113527248, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.82
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNTGFILTL SCPDQPGIVH AVSGLLFQHG CNIVDSDQYG DEYAGRFFMR VHFTPAAGGP  60
   61 DLDTLKAAFA PVGDQFSMQW ELNDAAVKPR VMIMVSKIGH CLNDLLFRAK VGGLPVEIAA 120
  121 IVSNHRDFYQ LAASYDVPFF HLPLMNASAE QKAAQEARVF DVVQEQKIDL VVLARYMQVL 180
  181 SDDLCRKLAG RAINIHHSFL PSFKGAKPYY QAHERGVKLI GATAHYVTAD LDEGPIIEQE 240
  241 IERVDHSMDP EQLTAVGRDV ECVALARAVK WHAEHRILLN GHKTVVFK

Type	Start	End	Confidence
Signal Peptide	1	21	0.82
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	288	0.99