YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ENB1
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.47
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Predicted Protein Segments [Hide List]:

Type	Start	End	Confidence
Cytoplasmic	1	130	0.65
Transmembrane Helix	131	152	0.84
Non-Cytoplasmic	153	154	0.47
Transmembrane Helix	155	178	0.57
Cytoplasmic	179	187	0.51
Transmembrane Helix	188	213	0.79
Non-Cytoplasmic	214	221	0.59
Transmembrane Helix	222	245	0.91
Cytoplasmic	246	277	0.65
Transmembrane Helix	278	300	0.91
Non-Cytoplasmic	301	309	0.54
Transmembrane Helix	310	331	0.91
Cytoplasmic	332	341	0.59
Transmembrane Helix	342	363	0.47
Non-Cytoplasmic	364	364	0.35
Transmembrane Helix	365	383	0.48
Cytoplasmic	384	390	0.43
Transmembrane Helix	391	409	0.52
Non-Cytoplasmic	410	414	0.63
Transmembrane Helix	415	434	0.91
Cytoplasmic	435	440	0.77
Transmembrane Helix	441	463	0.87
Non-Cytoplasmic	464	482	0.79
Transmembrane Helix	483	502	0.89
Cytoplasmic	503	551	0.87
Transmembrane Helix	552	574	0.91
Non-Cytoplasmic	575	606	0.88

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLETDHSRND NLDDKSTVCY SEKTDSNVEK STTSGLRRID AVNKVLSDYS SFTAFGVTFS  60
   61 SLKTALLVAL FLQGYCTGLG GQISQSIQTY AANSFGKHSQ VGSINTVKSI VASVVAVPYA 120
  121 RISDRFGRIE CWIFALVLYT IGEIISAATP TFSGLFAGIV IQQFGYSGFR LLATALTGDL 180
  181 SGLRDRTFAM NIFLIPVIIN TWVSGNIVSS VAGNVAPYKW RWGYGIFCII VPISTLILVL 240
  241 PYVYAQYISW RSGKLPPLKL KEKGQTLRQT LWKFADDINL IGVILFTAFL VLVLLPLTIA 300
  301 GGATSKWREG HIIAMIVVGG CLGFIFLIWE LKFAKNPFIP RVYLGDPTIY VALLMEFVWR 360
  361 LGLQIELEYL VTVLMVAFGE STLSAQRIAQ LYNFLQSCTN IVVGIMLHFY PHPKVFVVAG 420
  421 SLLGVIGMGL LYKYRVVYDG ISGLIGAEIV VGIAGGMIRF PMWTLVHAST THNEMATVTG 480
  481 LLMSVYQIGD AVGASIAGAI WTQRLAKELI QRLGSSLGMA IYKSPLNYLK KYPIGSEVRV 540
  541 QMIESYSKIQ RLLIIVSISF AAFNAVLCFF LRGFTVNKKQ SLSAEEREKE KLKIKQQSWL 600
  601 RRVIGY