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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114047359, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCNPLTKMVL SSAIIIAGAF NASAAFALTS TQKTFLEAEK ALKKQDYATY KPLRAKLGDY  60
   61 PLAIYLDHDI DIGKLNDLRG NDAKAMIDKY QTTPMYQRLR SKYLLNAGGQ KRWNDFLSLA 120
  121 QDAPTDVRLQ CYFYEAKLAK GETQTAYTAA QSLWVYGDSR PKECDPLFNA WTKAGKRTQD 180
  181 VIWARMLLSF DEGQTSLLSY LSQKITVHSA EAKRLVAVFK DPNSLRHTEK FKDKNPIVGD 240
  241 IVAAGLKRLA RKDLDQAINL YTRYQKAKRF TPAQDQQLQK YLVRRVLIEQ DDNFKDWADN 300
  301 LLPEMKSDDM FERRLRWAIR EQDNTHIARY LDLLSPETLA KERWQYWLYR TNAKHAPESA 360
  361 TKALAAVSNE RNFYGFAASQ LLNKPVSLNQ SPEPVVDGAS QKLEDDLGFV RVLELMALDR 420
  421 YFDARYEWVA LLKRSNNEMR ARYGRYAHDQ GWYDFGVEAS IQGKLWDDIP LRFPMAHQSG 480
  481 FEHASKKHKV NIDEIRAISR RESAFFLYAT SGVGARGLMQ IMPATAKATA KKHGAKYRDP 540
  541 KDLYSAELNL NLGSAYYAQL LKEFNQNRVL ATAAYNAGPS RVRRWLAESN GQLDAMSFVE 600
  601 SIPFTETREY VQAVLSYRLI YEAQKQKPQP LFNEAELKFH Y

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle