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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: MGM1
Protein type: Transmembrane
Type Confidence: 0.55
Topology Confidence: 0.49
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNSTSLRAI PRVANYNTLV RMNASPVRLL ILRRQLATHP AILYSSPYIK SPLVHLHSRM  60
   61 SNVHRSAHAN ALSFVITRRS ISHFPKIISK IIRLPIYVGG GMAAAGSYIA YKMEEASSFT 120
  121 KDKLDRIKDL GESMKEKFNK MFSGDKSQDG GHGNDGTVPT ATLIAATSLD DDESKRQGDP 180
  181 KDDDDEDDDD EDDENDSVDT TQDEMLNLTK QMIEIRTILN KVDSSSAHLT LPSIVVIGSQ 240
  241 SSGKSSVLES IVGREFLPKG SNMVTRRPIE LTLVNTPNSN NVTADFPSMR LYNIKDFKEV 300
  301 KRMLMELNMA VPTSEAVSEE PIQLTIKSSR VPDLSLVDLP GYIQVEAADQ PIELKTKIRD 360
  361 LCEKYLTAPN IILAISAADV DLANSSALKA SKAADPKGLR TIGVITKLDL VDPEKARSIL 420
  421 NNKKYPLSMG YVGVITKTPS SINRKHLGLF GEAPSSSLSG IFSKGQHGQS SGEENTNGLK 480
  481 QIVSHQFEKA YFKENKKYFT NCQVSTKKLR EKLIKILEIS MSNALEPTST LIQQELDDTS 540
  541 YLFKVEFNDR HLTPKSYLLN NIDVLKLGIK EFQEKFHRNE LKSILRAELD QKVLDVLATR 600
  601 YWKDDNLQDL SSSKLESDTD MLYWHKKLEL ASSGLTKMGI GRLSTMLTTN AILKELDNIL 660
  661 ESTQLKNHEL IKDLVSNTAI NVLNSKYYST ADQVENCIKP FKYEIDLEER DWSLARQHSI 720
  721 NLIKEELRQC NSRYQAIKNA VGSKKLANVM GYLENESNLQ KETLGMSKLL LERGSEAIFL 780
  781 DKRCKVLSFR LKMLKNKCHS TIEKDRCPEV FLSAVSDKLT STAVLFLNVE LLSDFFYNFP 840
  841 IELDRRLTLL GDEQVEMFAK EDPKISRHIE LQKRKELLEL ALEKIDSILV FKKSYKGVSK 900
  901 NL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle