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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: FRE3_YEAST
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.42
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYWVLLCGSI LLCCLSGASA SPAKTKMYGK LPLVLTDACM GVLGEVTWEY SSDDLYSSPA  60
   61 CTYEPALQSM LYCIYESLNE KGYSNRTFEK TFAAIKEDCA YYTDNLQNMT NADFYNMLNN 120
  121 GTTYIIQYSE GSANLTYPIE MDAQVRENYY YSYHGFYANY DIGHTYGGII CAYFVGVMIL 180
  181 ASILHYLSYT PFKTALFKQR LVRYVRRYLT IPTIWGKHAS SFSYLKIFTG FLPTRSEGVI 240
  241 ILGYLVLHTV FLAYGYQYDP YNLIFDSRRE QIARYVADRS GVLAFAHFPL IALFAGRNNF 300
  301 LEFISGVKYT SFIMFHKWLG RMMFLDAVIH GAAYTSYSVF YKDWAASKEE TYWQFGVAAL 360
  361 CIVGVMVFFS LAMFRKFFYE AFLFLHIVLG ALFFYTCWEH VVELSGIEWI YAAIAIWTID 420
  421 RLIRIVRVSY FGFPKASLQL VGDDIIRVTV KRPVRLWKAK PGQYVFVSFL HHLYFWQSHP 480
  481 FTVLDSIIKD GELTIILKEK KGVTKLVKKY VCCNGGKASM RLAIEGPYGS SSPVNNYDNV 540
  541 LLLTGGTGLP GPIAHAIKLG KTSAATGKQF IKLVIAVRGF NVLEAYKPEL MCLEDLNVQL 600
  601 HIYNTMEVPA LTPNDSLEIS QQDEKADGKG VVMATTLEQS PNPVEFDGTV FHHGRPNVEK 660
  661 LLHEVGDLNG SLAVVCCGPP VFVDEVRDQT ANLVLEKPAK AIEYFEEYQS W

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle